Pairwise Orthologs for GORGO21159

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene GORGO21159 (A0A2I2YGQ7)

E Gorilla gorilla gorilla | Alkyl transferase [DHDDS]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform GORGO21158.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			A	Archaeon GW2011_AR5	ARCGX00124		QT00_C0001G0124
			A	Candidatus Altiarchaeales archaeon Bin_400	UC08600880		uppS
			A	Heimdallarchaeota archaeon (strain B3-JM-08)	HEIAB00060		CEE45_00300
			A	Lokiarchaeota archaeon (strain CR_4)	LOKAC04340		RBG13Loki_4358
			A	Odinarchaeota archaeon (strain LCB_4)	ODILC00555		uppS
			A	Thorarchaeota archaeon (strain OWC)	THOAR00143		uppS
			A	Nanoarchaeota archaeon KR13_N2.mb.113	UC00500713		uppS
			A	Thermococci archaeon B88_G9	UC12801003		uppS
			A	Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)	ARCFU01195		O29049
			A	Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18)	ARCPA00479		WP_012939893
			A	Archaeoglobus veneficus (strain DSM 11195 / SNP6)	ARCVS00121		WP_013682842
			A	Ferroglobus placidus (strain DSM 10642 / AEDII12DO)	FERPA01916		WP_012966461
			A	Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3)	HALJB01225		HacjB3_06135
			A	Haloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755)	HALHT02199		uppS1
			A	Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)	HALMA01532		Q5V1I1
			A	Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541)	HALMD01507		A0A4D6KC60
			A	Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2)	HALUD02800		WP_015790552
			A	Natronomonas moolapensis (strain DSM 18674 / CECT 7526 / JCM 14361 / 8.8.11)	NATM801290		uppS1
			A	Natronomonas pharaonis (strain ATCC 35678 / DSM 2160 / CIP 103997 / JCM 8858 / NBRC 14720 / NCIMB 2260 / Gabara)	NATPD02235		WP_011323981
			A	Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)	HALS301403		A0A841H9A9
			A	Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)	HALSA01345		Q9HP68
			A	Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)	HALMT02265		WP_004059736
			A	Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)	HALVD02257		A0A8T5CTF0
			A	Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / KCTC 4070 / PR3)	HALBP00716		A0A482TRT2
			A	Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)	HALWD02405		uppS.repet478

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