Pairwise Orthologs for GADMO11548

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene GADMO11548 (A0A8C5CSP1)

E Gadus morhua | Hexosyltransferase [LOC115558253]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anguilla anguilla	ANGAN10118		XP_035260185
			E	Brugia malayi	BRUMA11204		A0A0K0INN1
			E	Haemonchus contortus	HAECO15416		A0A7I4YS59
			E	Tigriopus californicus	TIGCA13415		A0A553PJY7
			E	Folsomia candida	FOLCA12126		A0A226E5U6
			E	Heliconius melpomene	HELME12008		HMEL002413
			E	Dendroctonus ponderosae	DENPD03726		N6TYP8
			E	Culicoides sonorensis	CULSO01185		A0A336LNU1
			E	Mya arenaria	MYAAR12469		XP_052797517
			E	Mercenaria mercenaria	MERMC11556		XP_045158288
			E	Tegillarca granosa	TEGGR01164		KUTeg_003507
			E	Patella vulgata	PATVU11874		XP_050403603
			E	Exaiptasia diaphana	EXADI24703		A0A913XW41
			E	Oryza longistaminata	ORYLO07503		KN540978.1_FG003
			E	Biomphalaria glabrata	BIOGL09730		A0A9U8DXB2
			E	Biomphalaria glabrata	BIOGL09731		A0A9U8DX88
			E	Anabas testudineus	ANATE14212		A0A3Q1JJG1
			E	Seriola dumerili	SERDU14925		A0A3B4VAG4
			E	Echeneis naucrates	ECHNA24330		A0A665V307
			E	Cynoglossus semilaevis	CYNSE23855		A0A3P8V1I0
			E	Oryzias javanicus	ORYJA14524		ENSOJAG00000002966.1
			E	Oryzias melastigma	ORYME34951		A0A3B3BYN2
			E	Salarias fasciatus	SALFA54981		A0A672G025
			E	Neolamprologus brichardi	NEOBR24925		A0A3Q4HAS1
			E	Amphilophus citrinellus	AMPCI31492		A0A3Q0QVR1

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