Pairwise Orthologs for GADMO10322

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene GADMO10322 (A0A8C4Z751)

E Gadus morhua | Protein RFT1 homolog [rft1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Entamoeba dispar (strain ATCC PRA-260 / SAW760)	ENTDS04869		B0EG82
			E	Entamoeba histolytica	ENTHI00107		A0A5K1VHU5
			E	Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)	ENTH100008		A0A5K1VHU5
			E	Entamoeba invadens IP1	ENTIV08810		A0A0A1U4F3
			E	Entamoeba nuttalli (strain P19)	ENTNP03175		K2HG92
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP10508		D3BUS7
			E	Cavenderia fasciculata (strain SH3)	CAVFA10324		F4PY40
			E	Dictyostelium discoideum	DICDI09914		RFT1_DICDI
			E	Dictyostelium purpureum	DICPU10468		F1A142
			E	Tieghemostelium lacteum	TIELA05038		A0A151ZJR5
			E	Thecamonas trahens ATCC 50062	THETB03595		A0A0L0D4I6
			E	Bodo saltans	BODSA12904		A0A0S4IUH1
			E	Trypanosoma rangeli	TRYRA06998		A0A3S5IQL5
			E	Trypanosoma cruzi (strain CL Brener)	TRYCC18397		A0A2V2XFM9
			E	Naegleria fowleri	NAEFO04186		A0A6A5C088
			E	Naegleria gruberi strain NEG-M	NAEGR11216		D2VX23
			E	Emiliania huxleyi CCMP1516	EMIHU29811		R1G062
			E	Anaeramoeba ignava	ANAIG02841		A0A9Q0LTV2
			E	Monosiga brevicollis	MONBE03226		A9UQN8
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR507322		F2UEH7
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO302959		CAOG_05424
			E	Neolecta irregularis (strain DAH-3)	NEOID04431		A0A1U7LII4
			E	Pneumocystis murina (strain B123)	PNEMU02076		M7PHY6
			E	Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691)	SCHCR04121		S9VRB9
			E	Schizosaccharomyces japonicus (strain yFS275 / FY16936)	SCHJY03496		B6K507

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