Pairwise Orthologs for GADMO09385

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene GADMO09385 (A0A8C5F835)

E Gadus morhua | Lysozyme g [LOC115557863]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	candidate division Zixibacteria bacterium RBG-1 none	UC18501832		RBG1_1C00001G1832
			E	Branchiostoma lanceolatum	BRALA13177		BL05503
			E	Astyanax mexicanus	ASTMX15721		A0A8B9JEC4
			E	Electrophorus electricus	ELEEL12197		A0A4W4GCJ2
			E	Loxodonta africana	LOXAF10825		G3TK95
			E	Echinops telfairi	ECHTE06490		ENSETEG00000013093
			E	Oryctolagus cuniculus	RABIT08310		ENSOCUG00000004116.2
			E	Ochotona princeps	OCHPR11553		ENSOPRG00000007342
			E	Dipodomys ordii	DIPOR11944		A0A1S3FF64
			E	Heterocephalus glaber	HETGA05413		ENSHGLG00100018784.1
			E	Cavia aperea	CAVAP08322		ENSCAPG00000009489.1
			E	Cavia porcellus	CAVPO11328		H0VVB2
			E	Chinchilla lanigera	CHILA17226		A0A8C2V8Q3
			E	Octodon degus	OCTDE11441		A0A6P3FAT4
			E	Jaculus jaculus	JACJA21785		A0A8C5K362
			E	Cricetulus griseus	CRIGR21141		A0A8C2LAD3
			E	Mus musculus	MOUSE29923		LYG2_MOUSE
			E	Rattus norvegicus	RATNO43936		M0R6U6
			E	Nannospalax galili	NANGA08901		A0A8C6QJ32
			E	Ictidomys tridecemlineatus	ICTTR03051		ENSSTOG00000006998
			E	Cercocebus atys	CERAT23791		A0A2K5MVW1
			E	Chlorocebus sabaeus	CHLSB03983		A0A0D9RXB4
			E	Macaca fascicularis	MACFA06629		A0A2K5UUM1
			E	Macaca mulatta	MACMU08633		F7DH78
			E	Macaca nemestrina	MACNE13349		A0A2K6BNE2

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