Pairwise Orthologs for DROPS09426

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DROPS09426 (Q2LYS3)

E Drosophila pseudoobscura pseudoobscura | Large ribosomal subunit protein uL23m [LOC4812771]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638)	CONC206113		A0A137P1T4
			E	Branchiostoma floridae	BRAFL40977		A0A9J7HP11
			E	Branchiostoma lanceolatum	BRALA02216		A0A8J9ZAL1
			E	Petromyzon marinus	PETMA05432		S4RKU7
			E	Scyliorhinus torazame	SCYTO16831		A0A401Q3Y3
			E	Chiloscyllium punctatum	CHIPU07528		A0A401SFG2
			E	Callorhinchus milii	CALMI33624		A0A4W3HQS5
			E	Lepisosteus oculatus	LEPOC10454		W5M152
			E	Anguilla anguilla	ANGAN20790		XP_035272588
			E	Anabas testudineus	ANATE21908		ENSATEG00000019314.1
			E	Seriola dumerili	SERDU10890		A0A3B4V8X8
			E	Echeneis naucrates	ECHNA53005		A0A665U7D5
			E	Cynoglossus semilaevis	CYNSE25883		A0A3P8VM86
			E	Scophthalmus maximus	SCOMX01154		ENSSMAG00000009264.1
			E	Dicentrarchus labrax	DICLA41320		A0A8P4KIU5
			E	Gasterosteus aculeatus	GASAC15673		G3PAU9
			E	Sparus aurata	SPAAU44998		A0A671XH39
			E	Mola mola	MOLML18540		A0A3Q4BRH8
			E	Takifugu rubripes	TAKRU51064		A0A3B5KEC8
			E	Tetraodon nigroviridis	TETNG03829		H3CYN7
			E	Oryzias javanicus	ORYJA30635		A0A437DB83
			E	Oryzias latipes	ORYLA19084		ENSORLG00000019379
			E	Oryzias melastigma	ORYME03315		A0A3B3DV75
			E	Nothobranchius furzeri	NOTFU21345		A0A8C6VS23
			E	Kryptolebias marmoratus	KRYMA12463		A0A3Q2ZUU5

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