Pairwise Orthologs for EQUAS20500

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene EQUAS20500 (ENSEASG00005006270.1)

E Equus asinus asinus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL35148		A0A9J7MBP8
			E	Branchiostoma lanceolatum	BRALA00757		BL03871
			E	Scyliorhinus torazame	SCYTO20222		A0A401PUI8
			E	Chiloscyllium punctatum	CHIPU15017		A0A401T1W1
			E	Callorhinchus milii	CALMI24170		A0A4W3HPY9
			E	Lepisosteus oculatus	LEPOC18598		W5LWN3
			E	Anabas testudineus	ANATE30138		ENSATEG00000008917.1
			E	Gasterosteus aculeatus	GASAC06514		G3P6E4
			E	Oryzias javanicus	ORYJA29607		ENSOJAG00000017298.1
			E	Oryzias latipes	ORYLA10309		ENSORLG00000014003
			E	Oryzias melastigma	ORYME09407		A0A3B3C0Q9
			E	Nothobranchius furzeri	NOTFU25284		A0A8C6MF22
			E	Kryptolebias marmoratus	KRYMA01103		A0A3Q3ALB2
			E	Cyprinodon variegatus	CYPVA17442		A0A3Q2D692
			E	Gambusia affinis	GAMAF09056		ENSGAFG00000019768.1
			E	Poecilia formosa	POEFO21435		A0A096LYS3
			E	Poecilia reticulata	POERE19520		A0A3P9NZS1
			E	Xiphophorus maculatus	XIPMA14954		A0A3B5RCP0
			E	Hippocampus comes	HIPCM07626		A0A3Q2ZH69
			E	Gadus morhua	GADMO06280		A0A8C5B5S4
			E	Astyanax mexicanus	ASTMX02421		A0A8B9J7M0
			E	Ictalurus punctatus	ICTPU32175		A0A2D0RDL4
			E	Latimeria chalumnae	LATCH07943		H3AFK2
			E	Ornithorhynchus anatinus	ORNAN29071		A0A6I8N0U9
			E	Tachyglossus aculeatus	TACAU31695		XP_038596158

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