Pairwise Orthologs for RATNO45638

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO45638 (B0BMX0)

E Rattus norvegicus | Testin [Tesl]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA08308		L8GW18
			E	Danaus plexippus	DANPL14066		EHJ76845
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR507373		F2UJ15
			E	Petromyzon marinus	PETMA09215		S4RYU9
			E	Lepisosteus oculatus	LEPOC16389		W5NEZ8
			E	Anguilla anguilla	ANGAN26239		XP_035283332
			E	Anabas testudineus	ANATE22793		A0A3Q1H9T1
			E	Seriola dumerili	SERDU28880		A0A3B4UYJ1
			E	Echeneis naucrates	ECHNA54086		A0A665VE60
			E	Scophthalmus maximus	SCOMX00089		ENSSMAG00000000421.1
			E	Dicentrarchus labrax	DICLA42634		A0A8P4FXU5
			E	Gasterosteus aculeatus	GASAC15529		G3P3H9
			E	Mola mola	MOLML20139		A0A3Q4B0T7
			E	Takifugu rubripes	TAKRU51113		H2V3N6
			E	Nothobranchius furzeri	NOTFU20507		tes
			E	Kryptolebias marmoratus	KRYMA25040		A0A3Q3AF68
			E	Cyprinodon variegatus	CYPVA05292		A0A3Q2DXT7
			E	Gambusia affinis	GAMAF28349		ENSGAFG00000004426.1
			E	Poecilia formosa	POEFO16270		A0A087Y8Z7
			E	Poecilia reticulata	POERE27986		A0A3P9N2Y3
			E	Xiphophorus maculatus	XIPMA24298		A0A3B5QGZ2
			E	Haplochromis burtoni	HAPBU21581		A0A3Q2V8A7
			E	Neolamprologus brichardi	NEOBR02579		A0A3Q4H6A9
			E	Oreochromis aureus	OREAU33033		A0A668U515
			E	Amphilophus citrinellus	AMPCI25452		A0A3Q0SY67

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