Pairwise Orthologs for HUMAN54767

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN54767 (ZC11B_HUMAN)

E Homo sapiens | Zinc finger CCCH domain-containing protein 11B [ZC3H11B]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Diphasiastrum complanatum	DIPCM12244		O6H91_04G059100
			E	Gorilla gorilla gorilla	GORGO18150		A0A2I2YYF2
			E	Gorilla gorilla gorilla	GORGO37541		A0A2I2Z6A7
			E	Scyliorhinus torazame	SCYTO02133		A0A401PHY5
			E	Chiloscyllium punctatum	CHIPU12722		A0A401SVC6
			E	Callorhinchus milii	CALMI25247		A0A4W3K1P5
			E	Lepisosteus oculatus	LEPOC11649		W5N215
			E	Anguilla anguilla	ANGAN46015		XP_035243114
			E	Anabas testudineus	ANATE35139		A0A3Q1IC68
			E	Seriola dumerili	SERDU06999		A0A3B4TWT5
			E	Echeneis naucrates	ECHNA03258		A0A665T9S4
			E	Dicentrarchus labrax	DICLA21705		XP_051270942
			E	Gasterosteus aculeatus	GASAC04390		G3PCC8
			E	Sparus aurata	SPAAU39668		A0A671UBU3
			E	Tetraodon nigroviridis	TETNG15280		H3CFC3
			E	Oryzias javanicus	ORYJA03547		ENSOJAG00000017710.1
			E	Oryzias latipes	ORYLA14170		ENSORLG00000010432
			E	Oryzias melastigma	ORYME01142		A0A3B3CXP3
			E	Nothobranchius furzeri	NOTFU32644		A0A1A8A4Z7
			E	Kryptolebias marmoratus	KRYMA25240		A0A3Q3GKX3
			E	Poecilia reticulata	POERE27754		A0A3P9Q7E0
			E	Xiphophorus maculatus	XIPMA18192		M3ZRB7
			E	Salarias fasciatus	SALFA37085		A0A672I3K8
			E	Amphiprion ocellaris	AMPOC14877		A0A3Q1B742
			E	Esox lucius	ESOLU51910		A0A3P8ZDW4

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