Pairwise Orthologs for HUMAN62084

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN62084 (PP1B_HUMAN)

E Homo sapiens | Serine/threonine-protein phosphatase PP1-beta cata [PPP1CB]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Entamoeba invadens IP1	ENTIV08908		A0A0A1TY90
			E	Trypanosoma rangeli	TRYRA03292		A0A422NPG1
			E	Trypanosoma cruzi (strain CL Brener)	TRYCC13405		Q4D2Y7
			E	Pneumocystis murina (strain B123)	PNEMU02472		M7NIQ0
			E	Ajellomyces capsulatus (strain NAm1 / WU24)	AJECN04839		A6R5D3
			E	Gloeophyllum trabeum	GLOTR09187		estExt_fgenesh1_pm.C
			E	Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617)	GLOTA09430		S7RHQ0
			E	Grifola frondosa	GRIFR12863		A0A1C7LRL4
			E	Moniliophthora perniciosa (strain FA553 / isolate CP02)	MONPE00818		E2LVM5
			E	Branchiostoma floridae	BRAFL02199		A0A9J7N6M1
			E	Branchiostoma lanceolatum	BRALA23435		BL24918
			E	Eptatretus burgeri	EPTBU21686		A0A8C4R8N0
			E	Scyliorhinus torazame	SCYTO16173		A0A401PQ87
			E	Chiloscyllium punctatum	CHIPU09097		A0A401SK04
			E	Callorhinchus milii	CALMI41820		A0A4W3K041
			E	Lepisosteus oculatus	LEPOC10829		W5M3M3
			E	Anabas testudineus	ANATE34279		A0A3Q1JF29
			E	Seriola dumerili	SERDU22189		A0A3B4V1V7
			E	Echeneis naucrates	ECHNA08212		A0A665T867
			E	Cynoglossus semilaevis	CYNSE17424		A0A3P8WU56
			E	Scophthalmus maximus	SCOMX25197		Q2HYD1
			E	Dicentrarchus labrax	DICLA35159		A0A8C4I805
			E	Gasterosteus aculeatus	GASAC18380		G3Q9C9
			E	Takifugu rubripes	TAKRU48012		H2TBS2
			E	Oryzias javanicus	ORYJA46619		ENSOJAG00000002441.1

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