Pairwise Orthologs for HUMAN85752

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN85752 (UB2J1_HUMAN)

E Homo sapiens | Ubiquitin-conjugating enzyme E2 J1 [UBE2J1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO07542		A0A401NW09
			E	Chiloscyllium punctatum	CHIPU09140		A0A401SK51
			E	Callorhinchus milii	CALMI34092		A0A4W3IU41
			E	Lepisosteus oculatus	LEPOC00935		W5NJY4
			E	Anguilla anguilla	ANGAN24352		XP_035278592
			E	Anabas testudineus	ANATE30937		A0A3Q1IAI5
			E	Seriola dumerili	SERDU02204		A0A3B4U1T5
			E	Echeneis naucrates	ECHNA30799		A0A665V2P2
			E	Cynoglossus semilaevis	CYNSE26250		A0A3P8WT48
			E	Scophthalmus maximus	SCOMX17060		A0A2U9CUJ5
			E	Dicentrarchus labrax	DICLA16298		A0A8P4G4B9
			E	Gasterosteus aculeatus	GASAC07412		G3PEV0
			E	Sparus aurata	SPAAU60985		A0A671U5N8
			E	Mola mola	MOLML13408		A0A3Q3WWP6
			E	Takifugu rubripes	TAKRU14361		A0A674PAL6
			E	Oryzias javanicus	ORYJA00743		ENSOJAG00000017955.1
			E	Oryzias latipes	ORYLA11922		ENSORLG00000017888
			E	Oryzias melastigma	ORYME15718		A0A3B3B8M4
			E	Nothobranchius furzeri	NOTFU29951		A0A1A7ZXE0
			E	Kryptolebias marmoratus	KRYMA25617		A0A3Q3A6B7
			E	Cyprinodon variegatus	CYPVA27779		A0A3Q2D6T4
			E	Gambusia affinis	GAMAF28214		ENSGAFG00000020822.1
			E	Poecilia formosa	POEFO16295		A0A087Y8F5
			E	Poecilia reticulata	POERE19184		A0A3P9MWJ6
			E	Xiphophorus maculatus	XIPMA09032		M3ZEF5

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