Pairwise Orthologs for HUMAN61177

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN61177 (MK12_HUMAN)

E Homo sapiens | Mitogen-activated protein kinase 12 [MAPK12]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Deltaproteobacteria bacterium NC_groundwater_1656_Pr3_B-0.1um_70_40	U06DE00373		HY904_00305
			B	Sorangium cellulosum (strain So ce56)	SORC507363		WP_012240004
			B	Deltaproteobacteria bacterium M1803	U01DE04071		EP330_06575
			B	Planctomycetes bacterium NC_groundwater_1472_Ag_S-0.65um_69_29	U10PL03167		HY720_20990
			B	Verminephrobacter eiseniae (strain EF01-2)	VEREI04039		WP_011811850
			B	Ideonella sakaiensis (strain NBRC 110686 / TISTR 2288 / 201-F6)	IDESA04567		GAP38600
			E	Serendipita indica (strain DSM 11827)	SERID07438		G4TQ48
			E	Petromyzon marinus	PETMA01733		S4RVM7
			E	Scyliorhinus torazame	SCYTO02124		A0A401PI11
			E	Chiloscyllium punctatum	CHIPU12383		A0A401SUE1
			E	Callorhinchus milii	CALMI12055		A0A4W3JHC1
			E	Lepisosteus oculatus	LEPOC16344		W5NEL3
			E	Anguilla anguilla	ANGAN57228		XP_035258258
			E	Anabas testudineus	ANATE02132		A0A3Q1HJT0
			E	Seriola dumerili	SERDU04057		A0A3B4UN29
			E	Echeneis naucrates	ECHNA41651		A0A665TH06
			E	Scophthalmus maximus	SCOMX20758		ENSSMAG00000011946.1
			E	Dicentrarchus labrax	DICLA51062		XP_051248598
			E	Gasterosteus aculeatus	GASAC21350		G3Q5W0
			E	Sparus aurata	SPAAU49854		A0A671YJ99
			E	Tetraodon nigroviridis	TETNG07648		H3CN73
			E	Oryzias javanicus	ORYJA04328		A0A437C0Q9
			E	Oryzias latipes	ORYLA10839		A0A3P9ISQ8
			E	Oryzias melastigma	ORYME32427		A0A3B3CWN1
			E	Nothobranchius furzeri	NOTFU31152		A0A1A7ZAJ5

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