Pairwise Orthologs for HUMAN39035

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN39035 (TSH1_HUMAN)

E Homo sapiens | Teashirt homolog 1 [TSHZ1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO02008		A0A401PHC6
			E	Chiloscyllium punctatum	CHIPU02156		A0A401S034
			E	Callorhinchus milii	CALMI26826		A0A4W3HJ80
			E	Lepisosteus oculatus	LEPOC02268		W5M8R8
			E	Anguilla anguilla	ANGAN02636		XP_035260192
			E	Anabas testudineus	ANATE08657		A0A3Q1JQP2
			E	Seriola dumerili	SERDU09768		A0A3B4U9U9
			E	Echeneis naucrates	ECHNA26036		A0A665TA78
			E	Cynoglossus semilaevis	CYNSE06771		A0A3P8VXD1
			E	Scophthalmus maximus	SCOMX16708		A0A8D3A407
			E	Dicentrarchus labrax	DICLA15759		A0A8P4G430
			E	Gasterosteus aculeatus	GASAC13202		G3NPX3
			E	Sparus aurata	SPAAU59555		A0A671WL97
			E	Mola mola	MOLML18694		A0A3Q3VSD3
			E	Takifugu rubripes	TAKRU46061		A0A3B5K7Q6
			E	Tetraodon nigroviridis	TETNG12747		H3DP15
			E	Oryzias javanicus	ORYJA38121		ENSOJAG00000011125.1
			E	Oryzias latipes	ORYLA20381		ENSORLG00000020732
			E	Oryzias melastigma	ORYME32358		A0A3B3BY30
			E	Nothobranchius furzeri	NOTFU08734		A0A1A8UY25
			E	Kryptolebias marmoratus	KRYMA06176		A0A3Q3BJ04
			E	Cyprinodon variegatus	CYPVA09135		A0A3Q2ECQ0
			E	Gambusia affinis	GAMAF20210		ENSGAFG00000001942.1
			E	Poecilia formosa	POEFO00100		A0A087YMD5
			E	Poecilia reticulata	POERE11160		A0A3P9PGU9

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