Pairwise Orthologs for HUMAN24177

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN24177 (EDC3_HUMAN)

E Homo sapiens | Enhancer of mRNA-decapping protein 3 [EDC3]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Schizosaccharomyces octosporus (strain yFS286)	SCHOY01632		S9Q4N4
			E	Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)	LODEL05661		A5E7U9
			E	Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)	PICGU01031		A5DCM6
			E	Candida auris	CANAR03700		A0A2H0ZG23
			E	Cyberlindnera fabianii	CYBFA00367		A0A1V2LDU1
			E	Komagataella phaffii (strain GS115 / ATCC 20864)	KOMPG01839		C4QXF7
			E	Dekkera bruxellensis	DEKBR04152		e_gw1.7.544.1
			E	Mucor circinelloides	MUCCI06371		fgenesh1_pg.04_#_121
			E	Mucor circinelloides f. circinelloides (strain 1006PhL)	MUCC110850		S2JIM3
			E	Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)	RHIO912725		I1CHU2
			E	Rhizopus microsporus	RHIZD01015		A0A1X0SDS4
			E	Rhizopus oryzae	RHIOR12266		RO3G_12733
			E	Phycomyces blakesleeanus	PHYBL14868		fgenesh1_kg.37_#_13_
			E	Syncephalastrum racemosum	SYNRA01901		A0A1X2HKP6
			E	Creolimax fragrantissima	CREFR01038		CFRG1038
			E	Branchiostoma floridae	BRAFL05694		A0A9J7KF20
			E	Branchiostoma lanceolatum	BRALA17112		BL22044
			E	Eptatretus burgeri	EPTBU24163		A0A8C4NC77
			E	Scyliorhinus torazame	SCYTO08979		A0A401NGD8
			E	Chiloscyllium punctatum	CHIPU15038		A0A401T228
			E	Callorhinchus milii	CALMI04315		A0A4W3IGR6
			E	Lepisosteus oculatus	LEPOC12060		W5NBI9
			E	Anabas testudineus	ANATE22452		A0A3Q1ISW1
			E	Seriola dumerili	SERDU10094		A0A3B4VI95
			E	Echeneis naucrates	ECHNA52798		A0A665TWR9

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