Pairwise Orthologs for HUMAN11309

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN11309 (APLD1_HUMAN)

E Homo sapiens | Apolipoprotein L domain-containing protein 1 [APOLD1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Latimeria chalumnae	LATCH13840		H3B9A9
			E	Ornithorhynchus anatinus	ORNAN31199		A0A6I8MXB0
			E	Tachyglossus aculeatus	TACAU26498		XP_038623671
			E	Procavia capensis	PROCA10644		ENSPCAG00000004353
			E	Loxodonta africana	LOXAF19114		G3TLT2
			E	Oryctolagus cuniculus	RABIT12242		ENSOCUG00000025481.1
			E	Ochotona princeps	OCHPR15628		ENSOPRG00000018677
			E	Cavia porcellus	CAVPO13183		A0A286Y3V5
			E	Chinchilla lanigera	CHILA04353		A0A8C2VZP9
			E	Octodon degus	OCTDE03217		ENSODEG00000010534.1
			E	Mus musculus	MOUSE49605		E9Q0X2
			E	Rattus norvegicus	RATNO30933		APLD1_RAT
			E	Nannospalax galili	NANGA12834		A0A8C6RYZ3
			E	Ictidomys tridecemlineatus	ICTTR10984		ENSSTOG00000026399
			E	Cercocebus atys	CERAT17889		A0A2K5N049
			E	Chlorocebus sabaeus	CHLSB01981		A0A0D9R894
			E	Macaca fascicularis	MACFA02582		ENSMFAG00000001828.1
			E	Macaca mulatta	MACMU04176		A0A5F8AMQ2
			E	Macaca nemestrina	MACNE32492		A0A2K6BLW6
			E	Mandrillus leucophaeus	MANLE26151		A0A2K5XT82
			E	Papio anubis	PAPAN40018		A0A2I3M5P4
			E	Rhinopithecus bieti	RHIBE08225		A0A2K6MM39
			E	Rhinopithecus roxellana	RHIRO22314		A0A2K6QFY6
			E	Gorilla gorilla gorilla	GORGO05962		A0A2I2YUU2
			E	Pan paniscus	PANPA08776		A0A2R8ZM40

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