Pairwise Orthologs for HUMAN66118

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN66118 (SOSB2_HUMAN)

E Homo sapiens | SOSS complex subunit B2 [NABP1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			A	Candidatus Altiarchaeales archaeon Bin_400	UC08601760		GF416_03580
			A	Metallosphaera cuprina (strain Ar-4)	METCR01379		WP_013737988
			A	Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)	METS500667		A0A088E3G1
			E	Dictyostelium purpureum	DICPU02851		F0ZE43
			E	Petromyzon marinus	PETMA00151		S4RPF4
			E	Scyliorhinus torazame	SCYTO06461		A0A401PIG9
			E	Chiloscyllium punctatum	CHIPU11371		A0A401SRG3
			E	Callorhinchus milii	CALMI10720		A0A4W3JZN5
			E	Lepisosteus oculatus	LEPOC03011		W5MCR9
			E	Anguilla anguilla	ANGAN49956		A0A9D3RMZ1
			E	Anabas testudineus	ANATE24600		ENSATEG00000010377.1
			E	Seriola dumerili	SERDU02415		A0A3B4U2F7
			E	Echeneis naucrates	ECHNA12783		A0A665VF02
			E	Cynoglossus semilaevis	CYNSE11644		A0A3P8WQS0
			E	Scophthalmus maximus	SCOMX06481		ENSSMAG00000003442.1
			E	Dicentrarchus labrax	DICLA12090		A0A8P4GGP4
			E	Gasterosteus aculeatus	GASAC10512		G3NCF1
			E	Sparus aurata	SPAAU28289		A0A671W8I6
			E	Mola mola	MOLML10352		A0A3Q3W4Y8
			E	Takifugu rubripes	TAKRU23756		H2S6E4
			E	Tetraodon nigroviridis	TETNG08793		H3CTZ6
			E	Oryzias javanicus	ORYJA40987		ENSOJAG00000017439.1
			E	Oryzias latipes	ORYLA09399		ENSORLG00000008719
			E	Oryzias melastigma	ORYME13972		A0A3B3CKW2
			E	Nothobranchius furzeri	NOTFU21866		A0A1A7ZT42

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