Pairwise Orthologs for HUMAN64064

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN64064 (NPAS2_HUMAN)

E Homo sapiens | Neuronal PAS domain-containing protein 2 [NPAS2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL01572		A0A9J7L5L1
			E	Branchiostoma lanceolatum	BRALA28917		BL14421
			E	Eptatretus burgeri	EPTBU07596		A0A8C4NEN4
			E	Latimeria chalumnae	LATCH11484		H3AUX3
			E	Ornithorhynchus anatinus	ORNAN13452		A0A6I8P5U7
			E	Tachyglossus aculeatus	TACAU21179		XP_038617818
			E	Procavia capensis	PROCA13401		ENSPCAG00000004689
			E	Loxodonta africana	LOXAF10837		G3U6F6
			E	Echinops telfairi	ECHTE14740		ENSETEG00000008221
			E	Oryctolagus cuniculus	RABIT08301		ENSOCUG00000002384.3
			E	Ochotona princeps	OCHPR10603		ENSOPRG00000001179
			E	Fukomys damarensis	FUKDA20122		ENSFDAG00000013797.1
			E	Heterocephalus glaber	HETGA23019		ENSHGLG00100001039.1
			E	Chinchilla lanigera	CHILA17240		A0A8C2V3T2
			E	Cricetulus griseus	CRIGR11195		A0A9J7ETJ2
			E	Mus musculus	MOUSE30064		G3UYV8
			E	Rattus norvegicus	RATNO44092		F1MAG2
			E	Ictidomys tridecemlineatus	ICTTR03042		ENSSTOG00000008934
			E	Cercocebus atys	CERAT23774		A0A2K5LM84
			E	Chlorocebus sabaeus	CHLSB03992		A0A0D9RX73
			E	Macaca fascicularis	MACFA06651		ENSMFAG00000001513.1
			E	Macaca mulatta	MACMU08849		F6YT20
			E	Macaca nemestrina	MACNE13367		A0A2K6CCS0
			E	Mandrillus leucophaeus	MANLE02050		A0A2K5Y832
			E	Papio anubis	PAPAN10355		A0A096NPE2

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