Pairwise Orthologs for HUMAN67597

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN67597 (SHIP1_HUMAN)

E Homo sapiens | Phosphatidylinositol 3,4,5-trisphosphate 5-phospha [INPP5D]

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chiloscyllium punctatum	CHIPU01979		A0A401RZR6
			E	Callorhinchus milii	CALMI00642		A0A4W3IQY7
			E	Lepisosteus oculatus	LEPOC04274		W5MDJ1
			E	Anguilla anguilla	ANGAN14972		XP_035269890
			E	Anabas testudineus	ANATE16647		A0A3Q1JNH8
			E	Seriola dumerili	SERDU18501		A0A3B4VHD5
			E	Echeneis naucrates	ECHNA35717		A0A665U1T8
			E	Cynoglossus semilaevis	CYNSE20797		A0A3P8UV22
			E	Scophthalmus maximus	SCOMX04810		ENSSMAG00000001138.1
			E	Dicentrarchus labrax	DICLA38129		A0A8C4HMJ4
			E	Gasterosteus aculeatus	GASAC12164		G3NI52
			E	Sparus aurata	SPAAU67536		A0A671UQ55
			E	Mola mola	MOLML04088		A0A3Q3W667
			E	Oryzias javanicus	ORYJA22779		ENSOJAG00000000617.1
			E	Oryzias latipes	ORYLA13495		ENSORLG00000015584
			E	Oryzias melastigma	ORYME15420		A0A3B3CYS4
			E	Nothobranchius furzeri	NOTFU19092		A0A9D3BDY7
			E	Kryptolebias marmoratus	KRYMA15576		A0A3Q3ATW1
			E	Cyprinodon variegatus	CYPVA12024		A0A3Q2E828
			E	Gambusia affinis	GAMAF18896		ENSGAFG00000017284.1
			E	Poecilia formosa	POEFO16331		A0A096MCF0
			E	Poecilia reticulata	POERE25512		A0A3P9PRC7
			E	Xiphophorus maculatus	XIPMA35668		M4APW5
			E	Salarias fasciatus	SALFA43262		A0A672G545
			E	Astatotilapia calliptera	ASTCA24380		A0A3P8R6K1

Showing 1 to 25 of 25 rows rows per page