Pairwise Orthologs for HUMAN80011

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN80011 (AGRV1_HUMAN)

E Homo sapiens | Adhesion G-protein coupled receptor V1 [ADGRV1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / CCUG 39354 / LMG 10337 / NBRC 100064 / NCIMB 13643)	PSESL02642		WP_013633727
			B	Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)	GEOSL00276		GSU0279
			B	Geobacter sulfurreducens (strain DL-1 / KN400)	GEOSK00249		KN400_0250
			E	Monosiga brevicollis	MONBE04859		A9V5Y0
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR507724		F2UHC2
			E	Branchiostoma floridae	BRAFL05662		A0A9J7KJ45
			E	Petromyzon marinus	PETMA03239		S4RE61
			E	Chiloscyllium punctatum	CHIPU05963		A0A401SB10
			E	Callorhinchus milii	CALMI15327		A0A4W3JB69
			E	Lepisosteus oculatus	LEPOC06736		W5M0X7
			E	Anguilla anguilla	ANGAN37213		XP_035235779
			E	Anabas testudineus	ANATE11981		A0A3Q1H7Z6
			E	Seriola dumerili	SERDU06377		A0A3B4V3U8
			E	Echeneis naucrates	ECHNA20358		A0A665TER5
			E	Cynoglossus semilaevis	CYNSE32744		A0A3P8WCF8
			E	Scophthalmus maximus	SCOMX32555		ENSSMAG00000008015.1
			E	Dicentrarchus labrax	DICLA29099		XP_051279683
			E	Gasterosteus aculeatus	GASAC14481		G3P8K5
			E	Sparus aurata	SPAAU15374		A0A671Y6T3
			E	Mola mola	MOLML25399		A0A3Q3W600
			E	Oryzias latipes	ORYLA17710		ENSORLG00000010486
			E	Nothobranchius furzeri	NOTFU27515		A0A9D2XDL0
			E	Kryptolebias marmoratus	KRYMA11296		A0A3Q3F9Q3
			E	Cyprinodon variegatus	CYPVA06059		A0A3Q2DXJ8
			E	Gambusia affinis	GAMAF12399		ENSGAFG00000009473.1

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