Pairwise Orthologs for HUMAN89975

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN89975 (NEB1_HUMAN)

E Homo sapiens | Neurabin-1 [PPP1R9A]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma lanceolatum	BRALA07018		BL13383
			E	Chiloscyllium punctatum	CHIPU01370		A0A401RY10
			E	Callorhinchus milii	CALMI11783		A0A4W3IDB7
			E	Lepisosteus oculatus	LEPOC02723		W5MYD0
			E	Anguilla anguilla	ANGAN30734		XP_035284731
			E	Anabas testudineus	ANATE05488		A0A3Q1J7J6
			E	Seriola dumerili	SERDU08444		A0A3B4TPT0
			E	Echeneis naucrates	ECHNA19598		A0A665VB92
			E	Cynoglossus semilaevis	CYNSE13792		A0A3P8W1N6
			E	Scophthalmus maximus	SCOMX19906		ENSSMAG00000013688.1
			E	Dicentrarchus labrax	DICLA49640		A0A8P4GDZ1
			E	Sparus aurata	SPAAU22386		A0A671U1P2
			E	Mola mola	MOLML09268		A0A3Q4BWR5
			E	Takifugu rubripes	TAKRU06048		H2UUR5
			E	Oryzias javanicus	ORYJA35719		A0A3S2Q174
			E	Oryzias latipes	ORYLA01792		ENSORLG00000004418
			E	Oryzias melastigma	ORYME26950		A0A3B3CDW4
			E	Nothobranchius furzeri	NOTFU14030		ppp1r9a
			E	Cyprinodon variegatus	CYPVA08531		A0A3Q2D3J2
			E	Gambusia affinis	GAMAF14830		ENSGAFG00000018089.1
			E	Poecilia formosa	POEFO21501		A0A087Y2I1
			E	Poecilia reticulata	POERE03423		A0A3P9N0X0
			E	Xiphophorus maculatus	XIPMA05151		A0A3B5PYK0
			E	Salarias fasciatus	SALFA49269		A0A672HX74
			E	Astatotilapia calliptera	ASTCA23023		A0A3P8R4B7

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