Pairwise Orthologs for HUMAN03450

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN03450 (NKX62_HUMAN)

E Homo sapiens | Homeobox protein Nkx-6.2 [NKX6-2]

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma lanceolatum	BRALA16262		BL21899
			E	Scyliorhinus torazame	SCYTO01426		A0A401PD30
			E	Chiloscyllium punctatum	CHIPU00696		A0A401RVY2
			E	Callorhinchus milii	CALMI02760		A0A4W3JIM9
			E	Lepisosteus oculatus	LEPOC13607		W5MKR6
			E	Anguilla anguilla	ANGAN56314		A0A9D3LJK1
			E	Anabas testudineus	ANATE09029		ENSATEG00000009699.1
			E	Seriola dumerili	SERDU12312		A0A3B4VEG0
			E	Echeneis naucrates	ECHNA10422		A0A665UFU2
			E	Cynoglossus semilaevis	CYNSE05155		A0A3P8VPV4
			E	Scophthalmus maximus	SCOMX08558		A0A8D3CGV9
			E	Dicentrarchus labrax	DICLA02394		A0A8C4ETF3
			E	Gasterosteus aculeatus	GASAC09668		G3NEF0
			E	Sparus aurata	SPAAU09973		A0A671V0X2
			E	Takifugu rubripes	TAKRU38873		H2TKI8
			E	Tetraodon nigroviridis	TETNG19628		H3DI76
			E	Oryzias javanicus	ORYJA46243		ENSOJAG00000018968.1
			E	Oryzias melastigma	ORYME07764		A0A3B3B5Q4
			E	Nothobranchius furzeri	NOTFU04756		A0A1A8UP58
			E	Kryptolebias marmoratus	KRYMA23124		A0A3Q3GBG8
			E	Cyprinodon variegatus	CYPVA17584		A0A3Q2CMK5
			E	Gambusia affinis	GAMAF03649		A0A315VQF9
			E	Poecilia formosa	POEFO14449		A0A087XJF1
			E	Poecilia reticulata	POERE09618		A0A3P9P358
			E	Xiphophorus maculatus	XIPMA20329		M3ZZD3

Showing 1 to 25 of 25 rows rows per page