Pairwise Orthologs for HUMAN94534

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN94534 (VA0D2_HUMAN)

E Homo sapiens | V-type proton ATPase subunit d 2 [ATP6V0D2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			A	Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)	THEKO01597		Q5JDR9
			A	Thermococcus onnurineus (strain NA1)	THEON01757		WP_012572712
			A	Thermococcus sibiricus (strain DSM 12597 / MM 739)	THESM01773		WP_015850061
			E	Ornithorhynchus anatinus	ORNAN19468		F6PTN7
			E	Tachyglossus aculeatus	TACAU05063		XP_038601921
			E	Procavia capensis	PROCA05726		ENSPCAG00000001333
			E	Loxodonta africana	LOXAF16391		G3T2G6
			E	Echinops telfairi	ECHTE13666		ENSETEG00000006482
			E	Oryctolagus cuniculus	RABIT09800		G1SYX5
			E	Ochotona princeps	OCHPR11304		ENSOPRG00000004568
			E	Dipodomys ordii	DIPOR02735		A0A1S3ETZ5
			E	Fukomys damarensis	FUKDA20697		A0A091CT90
			E	Heterocephalus glaber	HETGA00902		G5ATW5
			E	Cavia porcellus	CAVPO00054		A0A286X8T5
			E	Chinchilla lanigera	CHILA05491		A0A8C2YL06
			E	Octodon degus	OCTDE21169		ENSODEG00000004115.1
			E	Jaculus jaculus	JACJA08315		A0A8C5KNC0
			E	Cricetulus griseus	CRIGR23333		ENSCGRG00000001630.1
			E	Mus musculus	MOUSE42747		VA0D2_MOUSE
			E	Rattus norvegicus	RATNO32183		VA0D2_RAT
			E	Nannospalax galili	NANGA22844		A0A8C6RAJ9
			E	Ictidomys tridecemlineatus	ICTTR17774		ENSSTOG00000024049
			E	Cercocebus atys	CERAT14725		A0A2K5LW90
			E	Chlorocebus sabaeus	CHLSB17238		A0A0D9RKY4
			E	Macaca fascicularis	MACFA41202		ENSMFAG00000035571.1

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