Pairwise Orthologs for HUMAN100342

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN100342 (A0A087X0R0)

E Homo sapiens | [histone H3]-trimethyl-L-lysine(27) demethylase [KDM6A]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO08980		A0A401NGE5
			E	Chiloscyllium punctatum	CHIPU15584		A0A401T3G5
			E	Callorhinchus milii	CALMI03222		A0A4W3IF57
			E	Lepisosteus oculatus	LEPOC05480		W5M1D4
			E	Oryzias latipes	ORYLA09611		ENSORLG00000013473
			E	Gambusia affinis	GAMAF27575		ENSGAFG00000002393.1
			E	Latimeria chalumnae	LATCH09797		H3AAY0
			E	Ornithorhynchus anatinus	ORNAN09694		A0A6I8NJD5
			E	Tachyglossus aculeatus	TACAU19795		XP_038616347
			E	Loxodonta africana	LOXAF06592		G3TDX3
			E	Echinops telfairi	ECHTE14588		ENSETEG00000007802
			E	Oryctolagus cuniculus	RABIT13441		ENSOCUG00000014741.3
			E	Fukomys damarensis	FUKDA22443		ENSFDAG00000014790.1
			E	Heterocephalus glaber	HETGA25756		ENSHGLG00100009645.1
			E	Cavia porcellus	CAVPO14465		H0VR46
			E	Chinchilla lanigera	CHILA21887		A0A8C2UKT3
			E	Octodon degus	OCTDE23469		A0A6P3FGF7
			E	Jaculus jaculus	JACJA17441		A0A8C5P0L1
			E	Cricetulus griseus	CRIGR06669		ENSCGRG00000002927.1
			E	Mus musculus	MOUSE66600		KDM6A_MOUSE
			E	Rattus norvegicus	RATNO44701		A0A8I6A5T3
			E	Nannospalax galili	NANGA21891		A0A8C6RJX6
			E	Ictidomys tridecemlineatus	ICTTR14614		ENSSTOG00000001596
			E	Cercocebus atys	CERAT35197		A0A2K5LS72
			E	Chlorocebus sabaeus	CHLSB18395		A0A0D9RN39

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