Pairwise Orthologs for HUMAN69603

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN69603 (LIMD1_HUMAN)

E Homo sapiens | LIM domain-containing protein 1 [LIMD1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Endocarpon pusillum (strain Z07020 / HMAS-L-300199)	ENDPU02611		U1GGV8
			E	Penicillium decumbens	PENDC04932		A0A1V6P970
			E	Phaeosphaeria nodorum	PHAND04513		SNOG_10206.1
			E	Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)	PHANO06574		A0A7U2I6C0
			E	Cordyceps militaris (strain CM01)	CORMM08383		G3JR65
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW04362		A0A015IHE3
			E	Lepisosteus oculatus	LEPOC02174		W5M1V5
			E	Anguilla anguilla	ANGAN02848		XP_035240534
			E	Seriola dumerili	SERDU09928		A0A3B4UX96
			E	Echeneis naucrates	ECHNA27405		A0A665V9I8
			E	Cynoglossus semilaevis	CYNSE06336		A0A3P8V6S3
			E	Scophthalmus maximus	SCOMX16535		ENSSMAG00000002424.1
			E	Gasterosteus aculeatus	GASAC13311		G3NVM7
			E	Mola mola	MOLML18871		A0A3Q3WRC2
			E	Takifugu rubripes	TAKRU46885		A0A3B5KHB3
			E	Tetraodon nigroviridis	TETNG12853		H3CW89
			E	Oryzias javanicus	ORYJA37669		A0A437CI51
			E	Oryzias latipes	ORYLA05442		H2LID8
			E	Oryzias melastigma	ORYME23642		A0A3B3BYW7
			E	Nothobranchius furzeri	NOTFU30338		LOC107396290
			E	Kryptolebias marmoratus	KRYMA25975		A0A3Q3BDP8
			E	Cyprinodon variegatus	CYPVA11875		A0A3Q2G365
			E	Poecilia formosa	POEFO16916		A0A096M3X3
			E	Astatotilapia calliptera	ASTCA02979		A0A3P8PQS3
			E	Haplochromis burtoni	HAPBU18775		A0A3Q2VKY9

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