Pairwise Orthologs for HUMAN70879

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN70879 (LRIG1_HUMAN)

E Homo sapiens | Leucine-rich repeats and immunoglobulin-like domai [LRIG1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO02570		A0A401PK45
			E	Chiloscyllium punctatum	CHIPU07561		A0A401SFQ8
			E	Callorhinchus milii	CALMI18658		A0A4W3HXV5
			E	Lepisosteus oculatus	LEPOC13809		W5MVU8
			E	Anabas testudineus	ANATE03007		ENSATEG00000017968.1
			E	Seriola dumerili	SERDU07311		A0A3B4VHR2
			E	Echeneis naucrates	ECHNA03640		A0A665TQ28
			E	Cynoglossus semilaevis	CYNSE03461		ENSCSEG00000005477.1
			E	Scophthalmus maximus	SCOMX28040		A0A6A4SVZ3
			E	Dicentrarchus labrax	DICLA22157		A0A8C4I169
			E	Gasterosteus aculeatus	GASAC04215		G3P425
			E	Sparus aurata	SPAAU40024		A0A671UTH8
			E	Mola mola	MOLML02485		A0A3Q3VLU5
			E	Takifugu rubripes	TAKRU21602		H2SX41
			E	Tetraodon nigroviridis	TETNG02118		H3D0N2
			E	Oryzias javanicus	ORYJA02368		ENSOJAG00000006895.1
			E	Oryzias melastigma	ORYME00955		A0A3B3DBR3
			E	Nothobranchius furzeri	NOTFU16858		A0A8C6VYK5
			E	Kryptolebias marmoratus	KRYMA20169		A0A3Q3A7N1
			E	Cyprinodon variegatus	CYPVA15447		A0A3Q2EAK0
			E	Gambusia affinis	GAMAF01163		ENSGAFG00000020396.1
			E	Poecilia formosa	POEFO12090		A0A087X6D2
			E	Poecilia reticulata	POERE27104		A0A3P9PZ80
			E	Xiphophorus maculatus	XIPMA17693		M3ZPJ9
			E	Salarias fasciatus	SALFA36358		A0A672GYQ5

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