Pairwise Orthologs for HUMAN65430

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN65430 (FAKD1_HUMAN)

E Homo sapiens | FAST kinase domain-containing protein 1, mitochond [FASTKD1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL21283		A0A9J7LJL4
			E	Branchiostoma lanceolatum	BRALA02540		BL09903
			E	Petromyzon marinus	PETMA03009		S4RLW2
			E	Scyliorhinus torazame	SCYTO07866		A0A401P1A5
			E	Chiloscyllium punctatum	CHIPU14451		A0A401T0A5
			E	Callorhinchus milii	CALMI10319		A0A4W3I6P0
			E	Lepisosteus oculatus	LEPOC03152		W5MMX3
			E	Anguilla anguilla	ANGAN11894		XP_035265897
			E	Anabas testudineus	ANATE24151		A0A3Q1IW84
			E	Seriola dumerili	SERDU02771		A0A3B4VA67
			E	Echeneis naucrates	ECHNA12868		A0A665VHE2
			E	Cynoglossus semilaevis	CYNSE11352		A0A3P8VX35
			E	Scophthalmus maximus	SCOMX06844		A0A2U9CA39
			E	Dicentrarchus labrax	DICLA12607		A0A8C4IRC7
			E	Gasterosteus aculeatus	GASAC10802		G3NNC1
			E	Sparus aurata	SPAAU29554		A0A671YSD7
			E	Mola mola	MOLML05050		A0A3Q3VUW4
			E	Takifugu rubripes	TAKRU25644		A0A674MHF6
			E	Tetraodon nigroviridis	TETNG08579		H3DHP7
			E	Oryzias latipes	ORYLA09851		ENSORLG00000017160
			E	Oryzias melastigma	ORYME13646		A0A3B3BAU0
			E	Nothobranchius furzeri	NOTFU22707		A0A1A8B1E3
			E	Kryptolebias marmoratus	KRYMA16278		A0A3Q3GBE0
			E	Cyprinodon variegatus	CYPVA18111		A0A3Q2DGM6
			E	Gambusia affinis	GAMAF05488		ENSGAFG00000002575.1

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