Pairwise Orthologs for HUMAN23194

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN23194 (RLP24_HUMAN)

E Homo sapiens | Probable ribosome biogenesis protein RLP24 [RSL24D1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA00489		L8HJG6
			E	Entamoeba dispar (strain ATCC PRA-260 / SAW760)	ENTDS04986		B0EN81
			E	Entamoeba histolytica	ENTHI03166		A0A5K1VKC6
			E	Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)	ENTH102856		A0A5K1VKC6
			E	Entamoeba invadens IP1	ENTIV07021		A0A0A1U272
			E	Entamoeba nuttalli (strain P19)	ENTNP01176		K2GBP3
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP11360		D3BSM2
			E	Cavenderia fasciculata (strain SH3)	CAVFA06247		F4PHX3
			E	Dictyostelium discoideum	DICDI02628		RLP24_DICDI
			E	Dictyostelium purpureum	DICPU05949		F0ZN39
			E	Tieghemostelium lacteum	TIELA00909		A0A151Z832
			E	Thecamonas trahens ATCC 50062	THETB01374		A0A0L0DQD0
			E	Guillardia theta	GUITH06638		EKX36931
			E	Guillardia theta (strain CCMP2712)	GUITC18690		L1IL14
			E	Leishmania braziliensis	LEIBR07126		A4H6L6
			E	Naegleria fowleri	NAEFO06145		A0A6A5BUU5
			E	Naegleria gruberi strain NEG-M	NAEGR14167		D2VJH1
			E	Diacronema lutheri	DIALT12617		A0A8J6CBY0
			E	Emiliania huxleyi CCMP1516	EMIHU29406		R1DW49
			E	Monosiga brevicollis	MONBE02897		A9UTB8
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR504702		F2U817
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO303785		A0A0D2X4V8
			E	Neolecta irregularis (strain DAH-3)	NEOID03267		A0A1U7LQV8
			E	Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691)	SCHCR01688		S9W2H2
			E	Schizosaccharomyces japonicus (strain yFS275 / FY16936)	SCHJY02886		B6K6Q6

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