Pairwise Orthologs for HUMAN23271

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN23271 (Z280D_HUMAN)

E Homo sapiens | Zinc finger protein 280D [ZNF280D]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma lanceolatum	BRALA34196		BL24012
			E	Amphiprion percula	AMPPE34056		A0A3P8TLY5
			E	Procavia capensis	PROCA08450		ENSPCAG00000010915
			E	Choloepus hoffmanni	CHOHO09462		ENSCHOG00000011316
			E	Notamacropus eugenii	NOTEU10026		ENSMEUG00000012983
			E	Ooceraea biroi	OOCBI05750		A0A026WHU6
			E	Capitella teleta	CAPTE23060		R7VIE4
			E	Capitella sp. 1	CAPI103324		fgenesh1_pg.C_scaffo
			E	Mya arenaria	MYAAR51540		XP_052781768
			E	Gigantopelta aegis	GIGAE30415		XP_041378132
			E	Scyliorhinus torazame	SCYTO11617		A0A401NUV7
			E	Chiloscyllium punctatum	CHIPU10419		A0A401SNS5
			E	Callorhinchus milii	CALMI03675		A0A4W3GAW7
			E	Lepisosteus oculatus	LEPOC11847		W5N7S8
			E	Anguilla anguilla	ANGAN20208		XP_035275372
			E	Anabas testudineus	ANATE13620		ENSATEG00000002821.1
			E	Seriola dumerili	SERDU05561		A0A3B4V623
			E	Echeneis naucrates	ECHNA23920		A0A665U6L3
			E	Cynoglossus semilaevis	CYNSE00021		A0A3P8WT94
			E	Scophthalmus maximus	SCOMX25981		ENSSMAG00000000449.1
			E	Dicentrarchus labrax	DICLA39734		A0A8P4JXP2
			E	Gasterosteus aculeatus	GASAC17428		G3PTG0
			E	Sparus aurata	SPAAU27094		A0A671YKM1
			E	Mola mola	MOLML05809		A0A3Q3X0M9
			E	Kryptolebias marmoratus	KRYMA02944		A0A3Q3A3I8

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