Pairwise Orthologs for HUMAN53820

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN53820 (RN5A_HUMAN)

E Homo sapiens | 2-5A-dependent ribonuclease [RNASEL]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anaeramoeba ignava	ANAIG10175		A0A9Q0LB94
			E	Chiloscyllium punctatum	CHIPU18302		A0A401RNF7
			E	Callorhinchus milii	CALMI30635		A0A4W3HE55
			E	Echeneis naucrates	ECHNA09579		A0A665XGH2
			E	Latimeria chalumnae	LATCH00432		H2ZU23
			E	Ornithorhynchus anatinus	ORNAN08301		F6XK88
			E	Tachyglossus aculeatus	TACAU17465		XP_038613947
			E	Loxodonta africana	LOXAF13686		G3TP60
			E	Echinops telfairi	ECHTE13623		ENSETEG00000008370
			E	Oryctolagus cuniculus	RABIT18963		ENSOCUG00000015922.2
			E	Dipodomys ordii	DIPOR05355		ENSDORG00000005886.2
			E	Fukomys damarensis	FUKDA22601		ENSFDAG00000016599.1
			E	Heterocephalus glaber	HETGA24226		ENSHGLG00100009841.1
			E	Chinchilla lanigera	CHILA01511		A0A8C2VLE7
			E	Octodon degus	OCTDE21874		ENSODEG00000002238.1
			E	Jaculus jaculus	JACJA10206		A0A8C5KK06
			E	Cricetulus griseus	CRIGR10578		A0A8C2QEX4
			E	Mus musculus	MOUSE27496		RN5A_MOUSE
			E	Rattus norvegicus	RATNO06744		A6ICV9
			E	Nannospalax galili	NANGA24604		A0A8C6RD65
			E	Ictidomys tridecemlineatus	ICTTR17459		ENSSTOG00000007352
			E	Cercocebus atys	CERAT21496		A0A2K5N1L9
			E	Chlorocebus sabaeus	CHLSB12160		A0A0D9RJA7
			E	Macaca fascicularis	MACFA19921		ENSMFAG00000044965.1
			E	Macaca mulatta	MACMU21219		F6WCF6

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