Pairwise Orthologs for HUMAN56320

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN56320 (CYTC_HUMAN)

E Homo sapiens | Cystatin-C [CST3]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Gasterosteus aculeatus	GASAC09822		G3NLB9
			E	Hippocampus comes	HIPCM27631		A0A3Q2Y9J5
			E	Gadus morhua	GADMO16380		A0A8C5BQQ2
			E	Tachyglossus aculeatus	TACAU00902		XP_038607667
			E	Loxodonta africana	LOXAF12859		G3TEB6
			E	Echinops telfairi	ECHTE00565		ENSETEG00000004390
			E	Dipodomys ordii	DIPOR14564		ENSDORG00000027673.1
			E	Fukomys damarensis	FUKDA20561		A0A091DGB5
			E	Heterocephalus glaber	HETGA00738		G5CBE0
			E	Cavia porcellus	CAVPO05122		A0A286XWV2
			E	Octodon degus	OCTDE14244		A0A6P3FAI5
			E	Jaculus jaculus	JACJA20701		A0A8C5NYW5
			E	Cricetulus griseus	CRIGR06796		G3H705
			E	Mus musculus	MOUSE35927		CYTC_MOUSE
			E	Rattus norvegicus	RATNO26352		P14841
			E	Nannospalax galili	NANGA22431		A0A8C6W8R5
			E	Ictidomys tridecemlineatus	ICTTR09653		I3NH43
			E	Cercocebus atys	CERAT02963		A0A2K5LUF5
			E	Chlorocebus sabaeus	CHLSB07911		A0A0D9RF55
			E	Macaca fascicularis	MACFA01028		ENSMFAG00000042941.1
			E	Macaca mulatta	MACMU01489		CYTC_MACMU
			E	Macaca nemestrina	MACNE32716		A0A2K6BZB2
			E	Rhinopithecus bieti	RHIBE43192		A0A2K6MKZ1
			E	Rhinopithecus roxellana	RHIRO45170		A0A2K6RGT1
			E	Pan paniscus	PANPA21982		A0A2R9C6Z7

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