Pairwise Orthologs for HUMAN60634

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN60634 (ABC3H_HUMAN)

E Homo sapiens | DNA dC->dU-editing enzyme APOBEC-3H [APOBEC3H]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Callorhinchus milii	CALMI35818		A0A4W3GN99
			E	Chinchilla lanigera	CHILA04543		A0A8C2W5A7
			E	Cercocebus atys	CERAT36827		A0A2K5LH58
			E	Chlorocebus sabaeus	CHLSB07325		A0A0D9R222
			E	Macaca fascicularis	MACFA00328		ENSMFAG00000031827.1
			E	Macaca mulatta	MACMU00678		A0A1D5QZU3
			E	Macaca nemestrina	MACNE27272		A0A2K6D795
			E	Mandrillus leucophaeus	MANLE01357		A0A2K5YSH3
			E	Papio anubis	PAPAN11531		A0A096NK51
			E	Rhinopithecus bieti	RHIBE30359		A0A2K6KGS1
			E	Rhinopithecus roxellana	RHIRO04267		A0A2K6NPI6
			E	Pan paniscus	PANPA23874		A0A2R9BCL9
			E	Pan troglodytes	PANTR26611		B7T0U6
			E	Pongo abelii	PONAB22299		H2P4F3
			E	Nomascus leucogenys	NOMLE33644		G1RYZ5
			E	Aotus nancymaae	AOTNA31749		A0A2K5D263
			E	Callithrix jacchus	CALJA20403		F7IFA5
			E	Cebus imitator	CEBIM20277		A0A2K5PCG8
			E	Saimiri boliviensis boliviensis	SAIBB21082		A0A2K6U5H2
			E	Carlito syrichta	CARSF19190		ENSTSYG00000032894.1
			E	Tupaia belangeri	TUPBE01391		ENSTBEG00000001532
			E	Bos taurus	BOVIN30687		B7T155
			E	Capra hircus	CAPHI25751		A0A452G8C7
			E	Vicugna pacos	VICPA10996		ENSVPAG00000011108
			E	Balaenoptera musculus	BALMU04416		A0A8C0D0G0

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