Pairwise Orthologs for HUMAN34872

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN34872 (XYLT2_HUMAN)

E Homo sapiens | Xylosyltransferase 2 [XYLT2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR504072		F2U7K4
			E	Scyliorhinus torazame	SCYTO10184		A0A401P431
			E	Callorhinchus milii	CALMI08490		A0A4W3KB58
			E	Lepisosteus oculatus	LEPOC01791		W5MZ48
			E	Anguilla anguilla	ANGAN08569		XP_035262505
			E	Anabas testudineus	ANATE29153		A0A3Q1HG08
			E	Seriola dumerili	SERDU24347		A0A3B4UUU8
			E	Echeneis naucrates	ECHNA48973		A0A665V5G2
			E	Cynoglossus semilaevis	CYNSE12610		A0A3P8WQK5
			E	Scophthalmus maximus	SCOMX13742		ENSSMAG00000009415.1
			E	Dicentrarchus labrax	DICLA46435		A0A8P4G5F0
			E	Gasterosteus aculeatus	GASAC08392		G3PIW7
			E	Sparus aurata	SPAAU03153		A0A671YPT7
			E	Mola mola	MOLML21359		A0A3Q3WMQ8
			E	Tetraodon nigroviridis	TETNG14957		H3D202
			E	Oryzias javanicus	ORYJA48721		A0A3S2P8P1
			E	Oryzias latipes	ORYLA16888		Q2KTA3
			E	Oryzias melastigma	ORYME17246		A0A3B3DUM6
			E	Nothobranchius furzeri	NOTFU05255		A0A1A7ZHJ3
			E	Kryptolebias marmoratus	KRYMA18841		A0A3Q3AKZ6
			E	Cyprinodon variegatus	CYPVA10625		A0A3Q2D2M7
			E	Gambusia affinis	GAMAF22472		ENSGAFG00000005845.1
			E	Poecilia formosa	POEFO18489		A0A087XM39
			E	Poecilia reticulata	POERE32233		A0A3P9PNH2
			E	Xiphophorus maculatus	XIPMA09653		A0A3B5Q1Y6

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