Pairwise Orthologs for HUMAN85160

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN85160 (AP2D_HUMAN)

E Homo sapiens | Transcription factor AP-2-delta [TFAP2D]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA05155		S4RFW6
			E	Scyliorhinus torazame	SCYTO05154		A0A401P408
			E	Chiloscyllium punctatum	CHIPU02601		A0A401S1J4
			E	Callorhinchus milii	CALMI15226		A0A4W3K309
			E	Lepisosteus oculatus	LEPOC00623		W5NHQ8
			E	Anguilla anguilla	ANGAN25277		A0A9D3ME53
			E	Anabas testudineus	ANATE31811		A0A3Q1JBB8
			E	Seriola dumerili	SERDU02131		A0A3B4TU89
			E	Echeneis naucrates	ECHNA31807		A0A665WLI9
			E	Cynoglossus semilaevis	CYNSE26865		A0A3P8UQ87
			E	Scophthalmus maximus	SCOMX17857		ENSSMAG00000003201.1
			E	Dicentrarchus labrax	DICLA17221		A0A8P4KR88
			E	Sparus aurata	SPAAU61651		A0A671VEY2
			E	Mola mola	MOLML13528		A0A3Q3XCT6
			E	Takifugu rubripes	TAKRU15209		A0A674N7Z8
			E	Tetraodon nigroviridis	TETNG18086		H3CED0
			E	Oryzias javanicus	ORYJA00347		ENSOJAG00000012592.1
			E	Oryzias latipes	ORYLA11875		ENSORLG00000017699
			E	Oryzias melastigma	ORYME15790		A0A3B3E177
			E	Nothobranchius furzeri	NOTFU07278		A0A9D2Z3T7
			E	Kryptolebias marmoratus	KRYMA07627		A0A3Q3BKJ4
			E	Cyprinodon variegatus	CYPVA04867		A0A3Q2DFW5
			E	Poecilia formosa	POEFO00175		A0A087YD23
			E	Poecilia reticulata	POERE18276		A0A3P9PNN5
			E	Xiphophorus maculatus	XIPMA09210		A0A3B5QM02

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