Pairwise Orthologs for DIPOR22579

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DIPOR22579 (A0A1S3GQ20)

E Dipodomys ordii | Lactosylceramide alpha-2,3-sialyltransferase [St3gal5]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA05734		S4RNF1
			E	Eptatretus burgeri	EPTBU10870		ENSEBUG00000014600.1
			E	Scyliorhinus torazame	SCYTO13429		A0A401P120
			E	Chiloscyllium punctatum	CHIPU18886		A0A401RQP0
			E	Callorhinchus milii	CALMI22848		A0A4W3IAR1
			E	Lepisosteus oculatus	LEPOC12811		W5MYB9
			E	Anguilla anguilla	ANGAN27305		A0A9D3MGB7
			E	Anabas testudineus	ANATE24728		A0A3Q1K264
			E	Seriola dumerili	SERDU11835		A0A3B4UPA1
			E	Echeneis naucrates	ECHNA28364		A0A665TS84
			E	Dicentrarchus labrax	DICLA27687		XP_051275131
			E	Gasterosteus aculeatus	GASAC21222		G3Q4N3
			E	Sparus aurata	SPAAU64157		A0A671W1M9
			E	Mola mola	MOLML11176		A0A3Q3WVF5
			E	Takifugu rubripes	TAKRU09708		A0A674P522
			E	Tetraodon nigroviridis	TETNG19431		H3BZ82
			E	Oryzias javanicus	ORYJA34014		ENSOJAG00000010205.1
			E	Oryzias latipes	ORYLA01383		ENSORLG00000008671
			E	Oryzias melastigma	ORYME21513		A0A3B3CIJ9
			E	Nothobranchius furzeri	NOTFU00230		A0A1A8U3A3
			E	Kryptolebias marmoratus	KRYMA15351		A0A3Q3A1B5
			E	Cyprinodon variegatus	CYPVA18801		A0A3Q2DF29
			E	Gambusia affinis	GAMAF11023		ENSGAFG00000015242.1
			E	Poecilia reticulata	POERE01926		A0A3P9N130
			E	Xiphophorus maculatus	XIPMA22555		A0A3B5QDQ0

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