Pairwise Orthologs for DIPOR20180

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DIPOR20180 (ENSDORG00000011479.2)

E Dipodomys ordii

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Kryptolebias marmoratus	KRYMA07843		A0A3Q2ZY12
			E	Tachyglossus aculeatus	TACAU27842		XP_038626037
			E	Procavia capensis	PROCA00961		ENSPCAG00000016864
			E	Mus musculus	MOUSE12137		GAS1_MOUSE
			E	Cercocebus atys	CERAT01917		A0A2K5KPC8
			E	Chlorocebus sabaeus	CHLSB03465		A0A0D9SB05
			E	Macaca fascicularis	MACFA12326		ENSMFAG00000027266.1
			E	Macaca mulatta	MACMU11874		A0A5F8A8Y5
			E	Macaca nemestrina	MACNE06301		A0A2K6ASU8
			E	Papio anubis	PAPAN08666		A0A096P1X1
			E	Gorilla gorilla gorilla	GORGO42019		G3SDX3
			E	Homo sapiens	HUMAN97463		GAS1_HUMAN
			E	Pan paniscus	PANPA39761		A0A2R9C294
			E	Pan troglodytes	PANTR44246		A0A2I3SJR6
			E	Pongo abelii	PONAB35786		H2PSK4
			E	Aotus nancymaae	AOTNA24003		A0A2K5C547
			E	Callithrix jacchus	CALJA17813		A0A5F4W4E0
			E	Cebus imitator	CEBIM36182		A0A2K5PLE3
			E	Propithecus coquereli	PROCO28130		A0A2K6GKJ4
			E	Otolemur garnettii	OTOGA01456		H0XHW7
			E	Bos taurus	BOVIN34896		ENSBTAG00000046803.2
			E	Capra hircus	CAPHI29452		A0A452DUH3
			E	Sus scrofa	PIGXX00387		A0A8D1VZE4
			E	Balaenoptera musculus	BALMU13123		A0A8B8XRZ5
			E	Canis lupus familiaris	CANLF00381		ENSCAFG00000023269

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