Pairwise Orthologs for DANRE50379

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE50379 (A9JRD5)

E Danio rerio | dual-specificity kinase [dyrk3]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Phanerochaete chrysosporium	PHACH07213		gww2.1.438.1
			E	Meloidogyne hapla	MELHA02936		A0A1I8B606
			B	Teredinibacter turnerae (strain ATCC 39867 / T7901)	TERTT01491		WP_015819975
			E	Dictyostelium purpureum	DICPU04851		F0ZJY5
			E	Leishmania donovani (strain BPK282A1)	LEIDB00893		E9BS59
			E	Leishmania infantum	LEIIN00889		A0A6L0Y1G3
			E	Leishmania major strain Friedlin	LEIMA06161		E9AF07
			E	Leishmania mexicana (strain MHOM/GT/2001/U1103)	LEIMU06488		E9B663
			E	Leishmania braziliensis	LEIBR00903		A4HMK7
			E	Leptomonas pyrrhocoris	LEPPY01186		A0A0M9GAG1
			E	Trypanosoma vivax (strain Y486)	TRYVY03110		G0UAK4
			E	Trypanosoma rangeli	TRYRA07566		A0A3R7KRL6
			E	Trypanosoma congolense (strain IL3000)	TRYCI03760		F9WDW4
			E	Trypanosoma cruzi (strain CL Brener)	TRYCC02912		Q4DXY0
			E	Giardia intestinalis (strain ATCC 50581 / GS clone H7)	GIAIB02566		C6LQ36
			E	Monosiga brevicollis	MONBE06679		A9V069
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR504439		F2U8F0
			E	Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656)	EXODN08940		H6C9C7
			E	Aspergillus oryzae (strain ATCC 42149 / RIB 40)	ASPOR07295		Q2U7K9
			E	Botryosphaeria parva (strain UCR-NP2)	BOTPV04955		R1GRR3
			E	Aureobasidium pullulans	AURPU00364		e_gw1.0.695.1
			E	Aureobasidium subglaciale (strain EXF-2481)	AURSE00622		A0A074YRT9
			E	Dothistroma septosporum (strain NZE10 / CBS 128990)	DOTSN02028		N1Q5B1
			E	Zymoseptoria tritici	ZYMTR01171		EGP91402
			E	Zymoseptoria tritici (strain CBS 115943 / IPO323)	ZYMTI01114		F9WZF2

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