Pairwise Orthologs for DANRE38740

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE38740 (A1L1S9)

E Danio rerio | [histone H3]-trimethyl-L-lysine(27) demethylase [kdm6al]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3)	TREBD01911		WP_013759083
			E	Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565)	CRYNJ01337		Q5K9C7
			E	Anabas testudineus	ANATE00620		ENSATEG00000002437.1
			E	Seriola dumerili	SERDU19138		A0A3B4UFD7
			E	Echeneis naucrates	ECHNA17760		A0A665X3S0
			E	Cynoglossus semilaevis	CYNSE07956		A0A3P8VUD0
			E	Scophthalmus maximus	SCOMX15132		A0A2U9AVP0
			E	Dicentrarchus labrax	DICLA34560		A0A8C4EAK2
			E	Gasterosteus aculeatus	GASAC20342		G3PQJ0
			E	Sparus aurata	SPAAU66146		A0A671YT51
			E	Mola mola	MOLML22495		A0A3Q3WJR6
			E	Takifugu rubripes	TAKRU47625		A0A674MG93
			E	Tetraodon nigroviridis	TETNG09671		H3DAM4
			E	Oryzias latipes	ORYLA08735		ENSORLG00000004864
			E	Oryzias melastigma	ORYME29450		A0A3B3BHX9
			E	Nothobranchius furzeri	NOTFU11219		A0A9D3BPB6
			E	Kryptolebias marmoratus	KRYMA26318		A0A3Q3AEX7
			E	Cyprinodon variegatus	CYPVA19509		A0A3Q2G3G8
			E	Gambusia affinis	GAMAF21875		ENSGAFG00000006350.1
			E	Poecilia formosa	POEFO13442		A0A087X7D0
			E	Poecilia reticulata	POERE21428		A0A3P9NXG3
			E	Xiphophorus maculatus	XIPMA23070		M3ZG71
			E	Salarias fasciatus	SALFA51404		A0A672IF11
			E	Astatotilapia calliptera	ASTCA25153		A0A3P8RI28
			E	Haplochromis burtoni	HAPBU06598		A0A3Q2WHX0

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