Pairwise Orthologs for DANRE38221

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE38221 (ENSDARG00000103479.2)

E Danio rerio

‹

This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform DANRE38220.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anabas testudineus	ANATE16505		A0A3Q1HM13
			E	Seriola dumerili	SERDU20273		A0A3B4V1N6
			E	Cynoglossus semilaevis	CYNSE20670		A0A3P8US79
			E	Dicentrarchus labrax	DICLA38348		XP_051233693
			E	Gasterosteus aculeatus	GASAC12100		G3NF29
			E	Tetraodon nigroviridis	TETNG15098		H3DD53
			E	Oryzias latipes	ORYLA12933		ENSORLG00000003198
			E	Astatotilapia calliptera	ASTCA11711		A0A3P8NJD0
			E	Haplochromis burtoni	HAPBU09351		A0A3Q2VJ18
			E	Neolamprologus brichardi	NEOBR11818		A0A3Q4MXW4
			E	Oreochromis aureus	OREAU13885		A0A668VZ03
			E	Oreochromis niloticus	ORENI19197		A0A669BSG9
			E	Amphilophus citrinellus	AMPCI03459		A0A3Q0RV05
			E	Amphiprion ocellaris	AMPOC00731		A0A3Q1CZ10
			E	Amphiprion percula	AMPPE18915		A0A3P8U6V7
			E	Esox lucius	ESOLU23581		A0A6Q2XQQ7
			E	Astyanax mexicanus	ASTMX00504		ENSAMXG00000012859
			E	Electrophorus electricus	ELEEL37486		A0A4W4EJW4
			E	Ictalurus punctatus	ICTPU02502		A0A9F7RMW3
			E	Salmo salar	SALSA10443		ENSSSAG00000050060.2
			E	Salmo salar	SALSA84842		A0A1S3PAP6
			E	Salmo trutta	SALTR29285		A0A673XFF1
			E	Salmo trutta	SALTR107385		A0A673WJX6
			E	Cyprinus carpio carpio	CYPCA47491		A0A9J7ZX82
			E	Cyprinus carpio carpio	CYPCA56501		A0A9J7XZ83

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