Pairwise Orthologs for DANRE35490

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE35490 (ENSDARG00000051940.8)

E Danio rerio

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Synechococcus sp. (strain WH7805)	SYNPV01160		EAR19433
			E	Monosiga brevicollis	MONBE08484		A9V1Y8
			E	Pan paniscus	PANPA30367		A0A2R9C0W5
			E	Bos taurus	BOVIN31599		A0A3Q1NB06
			E	Vulpes vulpes	VULVU17162		ENSVVUG00000004439.1
			E	Dasypus novemcinctus	DASNO05203		ENSDNOG00000017981
			E	Dermatophagoides pteronyssinus	DERPT10438		A0A6P6YA42
			E	Helicoverpa armigera	HELAM06883		LOC110376850
			E	Danaus plexippus	DANPL02417		EHJ71455
			E	Drosophila hydei	DROHY17000		A0A6J2SU28
			E	Drosophila novamexicana	DRONM14803		XP_030567879
			E	Anopheles gambiae	ANOGA05255		Q7QCS2
			E	Zootermopsis nevadensis	ZOONE11077		A0A067R3M0
			E	Electrophorus electricus	ELEEL30088		A0A4W4H985
			E	Electrophorus electricus	ELEEL49075		A0A4W4ENS2
			E	Capra hircus	CAPHI26532		A0A452FP65
			E	Capra hircus	CAPHI26531		A0A452E0F3
			E	Capra hircus	CAPHI26537		A0A452FFU2
			E	Heliconius melpomene	HELME04971		HMEL022542
			E	Heliconius melpomene	HELME01058		HMEL022609
			E	Drosophila willistoni	DROWI00832		B4MWT5
			E	Drosophila willistoni	DROWI10432		B4MRB3
			B	Solibacter usitatus (strain Ellin6076)	SOLUE01940		Acid_1981
			E	Aspergillus niger	ASPNG04886		A0A100IJ48
			E	Penicillium roqueforti (strain FM164)	PENRF11145		A0AAD4NI43

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