Pairwise Orthologs for DANRE32592

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE32592 (ENSDARG00000029331.7)

E Danio rerio

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL35560		C3YL49
			E	Branchiostoma lanceolatum	BRALA10726		BL95366
			E	Chiloscyllium punctatum	CHIPU07487		A0A401SFC6
			E	Callorhinchus milii	CALMI28443		A0A4W3HYA6
			E	Lepisosteus oculatus	LEPOC04763		W5N2G1
			E	Anabas testudineus	ANATE28249		ENSATEG00000023248.1
			E	Seriola dumerili	SERDU13312		A0A3B4VJG1
			E	Echeneis naucrates	ECHNA48310		A0A665U3K0
			E	Cynoglossus semilaevis	CYNSE11925		A0A3P8X6N3
			E	Scophthalmus maximus	SCOMX14593		ENSSMAG00000011961.1
			E	Dicentrarchus labrax	DICLA47839		XP_051244311
			E	Gasterosteus aculeatus	GASAC08021		G3P4X8
			E	Sparus aurata	SPAAU03166		A0A671YNY4
			E	Mola mola	MOLML24925		A0A3Q4BN60
			E	Takifugu rubripes	TAKRU42144		H2V0F1
			E	Tetraodon nigroviridis	TETNG18249		H3CF75
			E	Oryzias javanicus	ORYJA49628		ENSOJAG00000012046.1
			E	Oryzias latipes	ORYLA16402		ENSORLG00000002605
			E	Oryzias melastigma	ORYME18037		A0A3B3DW88
			E	Nothobranchius furzeri	NOTFU08234		A0A1A8AIU0
			E	Kryptolebias marmoratus	KRYMA12725		A0A3Q3AAX1
			E	Cyprinodon variegatus	CYPVA05046		A0A3Q2EBE7
			E	Gambusia affinis	GAMAF14280		ENSGAFG00000003176.1
			E	Poecilia formosa	POEFO14817		A0A087XSZ9
			E	Poecilia reticulata	POERE31980		A0A3P9NX32

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