Pairwise Orthologs for DANRE32202

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE32202 (F1Q5S2)

E Danio rerio | Protein Z, vitamin K-dependent plasma glycoprotein [proza]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform DANRE32201.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Lepisosteus oculatus	LEPOC03653		W5M4Z9
			E	Anguilla anguilla	ANGAN54430		XP_035254993
			E	Anabas testudineus	ANATE28722		A0A3Q1KGY9
			E	Seriola dumerili	SERDU16406		A0A3B4U5I3
			E	Echeneis naucrates	ECHNA48920		A0A665V354
			E	Cynoglossus semilaevis	CYNSE12391		A0A3P8W3W7
			E	Scophthalmus maximus	SCOMX14006		A0A2U9CRW1
			E	Dicentrarchus labrax	DICLA47045		A0A8C4GXA1
			E	Gasterosteus aculeatus	GASAC08206		G3PC41
			E	Sparus aurata	SPAAU02659		A0A671Y1W4
			E	Mola mola	MOLML16350		A0A3Q3X8C9
			E	Takifugu rubripes	TAKRU41835		H2UUW3
			E	Oryzias javanicus	ORYJA48108		ENSOJAG00000000126.1
			E	Oryzias latipes	ORYLA16719		ENSORLG00000008569
			E	Oryzias melastigma	ORYME17512		A0A3B3DEW0
			E	Nothobranchius furzeri	NOTFU05530		A0A1A8UH01
			E	Kryptolebias marmoratus	KRYMA14350		A0A3Q3GNR7
			E	Cyprinodon variegatus	CYPVA16802		A0A3Q2DBE7
			E	Gambusia affinis	GAMAF24078		ENSGAFG00000020304.1
			E	Poecilia formosa	POEFO09002		A0A087XCK9
			E	Poecilia reticulata	POERE32465		A0A3P9NL79
			E	Xiphophorus maculatus	XIPMA11017		M3ZFC8
			E	Astatotilapia calliptera	ASTCA30395		A0A3P8RK86
			E	Haplochromis burtoni	HAPBU10661		A0A3Q2WSB0
			E	Neolamprologus brichardi	NEOBR11295		A0A3Q4FYY9

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