Pairwise Orthologs for DANRE32094

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE32094 (ENSDARG00000069787.6)

E Danio rerio

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Gambusia affinis	GAMAF14373		ENSGAFG00000006960.1
			E	Poecilia reticulata	POERE31686		A0A3P9N156
			E	Xiphophorus maculatus	XIPMA10920		A0A3B5QE93
			E	Salarias fasciatus	SALFA23250		A0A672G1S1
			E	Salmo trutta	SALTR23736		A0A673VY26
			E	Equus caballus	HORSE03755		ENSECAG00000020115.3
			E	Dasypus novemcinctus	DASNO11048		ENSDNOG00000012854
			E	Protobothrops mucrosquamatus	PROMU16654		XP_015679649
			E	Asterias rubens	ASTRU08070		XP_033630971
			E	Vanessa tameamea	VANTA05830		A0A8B8HMA3
			E	Hermetia illucens	HERIL19355		A0A7R8Z018
			E	Anopheles stephensi	ANOST04408		A0A182Y7H2
			E	Anopheles darlingi	ANODA04393		W5JPD2
			E	Nasonia vitripennis	NASVI00361		A0A7M7PYU9
			E	Pediculus humanus subsp. corporis	PEDHC05115		E0VN37
			E	Cyprinus carpio carpio	CYPCA01436		A0A8C0YGM2
			E	Cyprinus carpio carpio	CYPCA20914		A0A9J8CSE4
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR502511		F2U2C0
			E	Ixodes persulcatus	IXOPE25883		HPB47_010650
			E	Lepeophtheirus salmonis	LEPSM11038		A0A0K2VHW9
			E	Hyalella azteca	HYAAZ01208		A0A8B7NH35
			E	Heliconius melpomene	HELME12009		HMEL002414
			E	Harpegnathos saltator	HARSA01218		E2BAB1
			E	Fonticula alba	FONAL02261		A0A058ZAA7
			E	Ceratopteris richardii	CERRI48514		A0A8T2RR52

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