Pairwise Orthologs for DANRE31570

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE31570 (F1QSP4)

E Danio rerio | V-type proton ATPase proteolipid subunit [atp6v0ca]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	bacterium AS04akNAM_5	UC09800174		GXX44_03060
			B	Acholeplasma laidlawii (strain PG-8A)	ACHLI00943		A0A553IHC2
			B	Firmicutes bacterium Ch29	U04FI01551		HPY66_1564
			B	Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)	LACP703031		WP_012201084
			B	Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / CCUG 9996 / CIP 106432 / VR4)	ACIFV00179		A0A1H2VF34
			B	Candidatus Coatesbacteria bacterium Bin_172	UC08500998		GF399_08600
			B	Spirochaetes bacterium Zod_Metabat.1289	U02SP01666		JW827_07780
			E	Nematocida parisii (strain ERTm3)	NEMP302238		I3EEF9
			E	Eptatretus burgeri	EPTBU13786		A0A8C4QEN4
			E	Poecilia formosa	POEFO18499		A0A087XRA5
			E	Astatotilapia calliptera	ASTCA30828		A0A3P8P344
			E	Haplochromis burtoni	HAPBU23505		A0A3Q2W2G5
			E	Neolamprologus brichardi	NEOBR28491		A0A3Q4G4U3
			E	Nannospalax galili	NANGA13199		A0A8C6W2H5
			E	Haliaeetus leucocephalus	HALLE07516		XP_010563547
			E	Falco tinnunculus	FALTI01608		A0A8C4UU50
			E	Strigops habroptila	STRHB10292		A0A672TMB3
			E	Melopsittacus undulatus	MELUD06385		A0A8C6J1H6
			E	Tyto alba	TYTAL23272		XP_032859882
			E	Pelodiscus sinensis	PELSI02517		K7FDN5
			E	Sphenodon punctatus	SPHPU17927		A0A8D0HBP4
			E	Haemaphysalis longicornis	HAELO24397		A0A9J6H9W6
			E	Ixodes persulcatus	IXOPE01627		HPB47_014139
			E	Dermacentor andersoni	DERAN11026		XP_050032728
			E	Dermacentor silvarum	DERSI17861		XP_037571231

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