Pairwise Orthologs for DANRE25526

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE25526 (A0A286Y855)

E Danio rerio | Phosphate-regulating endopeptidase homolog, X-link [phex]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform DANRE25525.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL22874		A0A9J7N213
			E	Eptatretus burgeri	EPTBU00999		A0A8C4QXV7
			E	Chiloscyllium punctatum	CHIPU19045		A0A401RR34
			E	Callorhinchus milii	CALMI42723		A0A4W3ISP1
			E	Lepisosteus oculatus	LEPOC11053		W5M818
			E	Anguilla anguilla	ANGAN16860		A0A9D3MK38
			E	Anabas testudineus	ANATE01178		ENSATEG00000022809.1
			E	Seriola dumerili	SERDU17879		A0A3B4UEM5
			E	Echeneis naucrates	ECHNA38907		A0A665X4V3
			E	Cynoglossus semilaevis	CYNSE21994		A0A3P8UJQ5
			E	Scophthalmus maximus	SCOMX18808		ENSSMAG00000007045.1
			E	Dicentrarchus labrax	DICLA19409		XP_051266576
			E	Gasterosteus aculeatus	GASAC02968		G3NPJ2
			E	Sparus aurata	SPAAU47557		A0A671XR75
			E	Mola mola	MOLML01049		A0A3Q3VTZ4
			E	Takifugu rubripes	TAKRU02630		H2S1G1
			E	Tetraodon nigroviridis	TETNG11948		H3D7Y1
			E	Oryzias javanicus	ORYJA25772		ENSOJAG00000018127.1
			E	Oryzias latipes	ORYLA09347		ENSORLG00000014048
			E	Oryzias melastigma	ORYME20345		ENSOMEG00000023856.1
			E	Nothobranchius furzeri	NOTFU13755		A0A1A8AIT2
			E	Kryptolebias marmoratus	KRYMA08985		A0A3Q3BH41
			E	Cyprinodon variegatus	CYPVA03570		A0A3Q2GHX7
			E	Poecilia formosa	POEFO07204		A0A087XD04
			E	Poecilia reticulata	POERE17769		A0A3P9QI17

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