Pairwise Orthologs for DANRE23346

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE23346 (Q1L8Y8)

E Danio rerio | Alpha-2A adrenergic receptor [adra2a]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Tachyglossus aculeatus	TACAU17735		XP_038614628
			E	Parus major	PARMJ22144		ENSPMJG00000005219.1
			E	Crotalus tigris	CROTI23686		XP_039210470
			E	Spizellomyces punctatus	SPIPN07506		SPPG_07927
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD08461		A0A0L0H7Q2
			E	Scyliorhinus torazame	SCYTO10747		A0A401PCS9
			E	Chiloscyllium punctatum	CHIPU25920		A0A401TI06
			E	Seriola dumerili	SERDU18197		A0A3B4U848
			E	Scophthalmus maximus	SCOMX31377		ENSSMAG00000001263.1
			E	Gasterosteus aculeatus	GASAC16590		G3Q493
			E	Sparus aurata	SPAAU55894		A0A671VVU7
			E	Mola mola	MOLML24349		A0A3Q3XHQ0
			E	Takifugu rubripes	TAKRU17393		A0A674PPW7
			E	Tetraodon nigroviridis	TETNG06824		H3CZ07
			E	Oryzias javanicus	ORYJA20618		A0A437DLB7
			E	Oryzias melastigma	ORYME29190		A0A3B3BKC9
			E	Kryptolebias marmoratus	KRYMA17092		A0A3Q3GWJ7
			E	Xiphophorus maculatus	XIPMA29601		M4B0L7
			E	Salarias fasciatus	SALFA18939		A0A672GN20
			E	Haplochromis burtoni	HAPBU15796		A0A3Q2VRT0
			E	Neolamprologus brichardi	NEOBR10679		A0A3Q4GCY5
			E	Oreochromis niloticus	ORENI61217		I3KZ72
			E	Amphilophus citrinellus	AMPCI11950		A0A3Q0S8U3
			E	Hippocampus comes	HIPCM07276		A0A3Q2Z954
			E	Gadus morhua	GADMO42398		A0A8C5FND0

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