Pairwise Orthologs for DANRE15648

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE15648 (F1RDW1)

E Danio rerio | Pre-B-cell leukemia homeobox-interacting protein 1 [pbxip1a]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anguilla anguilla	ANGAN31192		XP_035286575
			E	Anabas testudineus	ANATE05131		A0A3Q1I1V1
			E	Seriola dumerili	SERDU08791		A0A3B4V2B8
			E	Echeneis naucrates	ECHNA20267		A0A665WYY4
			E	Cynoglossus semilaevis	CYNSE14300		A0A3P8VBD6
			E	Scophthalmus maximus	SCOMX19502		A0A2U9D049
			E	Dicentrarchus labrax	DICLA50193		A0A8P4GQI7
			E	Sparus aurata	SPAAU22913		A0A671UNS6
			E	Mola mola	MOLML08929		A0A3Q3X863
			E	Takifugu rubripes	TAKRU05279		A0A3B5K689
			E	Oryzias javanicus	ORYJA35519		ENSOJAG00000006257.1
			E	Oryzias melastigma	ORYME31012		A0A3B3BJD9
			E	Nothobranchius furzeri	NOTFU28536		A0A9D3BK93
			E	Kryptolebias marmoratus	KRYMA01696		A0A3Q3FR95
			E	Cyprinodon variegatus	CYPVA06366		A0A3Q2G0D5
			E	Gambusia affinis	GAMAF15153		ENSGAFG00000005770.1
			E	Poecilia formosa	POEFO11333		A0A096M7P2
			E	Poecilia reticulata	POERE03974		A0A3P9Q4F5
			E	Xiphophorus maculatus	XIPMA05299		A0A3B5RDR7
			E	Salarias fasciatus	SALFA49916		A0A672IWK7
			E	Astatotilapia calliptera	ASTCA22623		A0A3P8PEK0
			E	Haplochromis burtoni	HAPBU12838		A0A3Q2XE72
			E	Neolamprologus brichardi	NEOBR07859		A0A3Q4HHH8
			E	Oreochromis aureus	OREAU35547		A0A668TMH5
			E	Oreochromis niloticus	ORENI42211		A0A669DZN9

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