Pairwise Orthologs for DANRE14114

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE14114 (Q7ZTA3)

E Danio rerio | Melanocyte-stimulating hormone receptor [mc1r]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO11391		A0A401NPX8
			E	Chiloscyllium punctatum	CHIPU06094		A0A401SBG9
			E	Callorhinchus milii	CALMI09152		A0A4W3JCY5
			E	Lepisosteus oculatus	LEPOC09020		W5LZ20
			E	Anguilla anguilla	ANGAN52472		XP_035252599
			E	Anabas testudineus	ANATE13567		ENSATEG00000001166.1
			E	Seriola dumerili	SERDU05619		A0A3B4VA33
			E	Echeneis naucrates	ECHNA23272		A0A665TFZ3
			E	Cynoglossus semilaevis	CYNSE24250		A0A3P8V8Z4
			E	Scophthalmus maximus	SCOMX26045		A0A2U9BCZ2
			E	Dicentrarchus labrax	DICLA39810		XP_051236492
			E	Gasterosteus aculeatus	GASAC17472		G3PTW2
			E	Sparus aurata	SPAAU25344		A0A671UZZ1
			E	Mola mola	MOLML05752		A0A3Q3WZW5
			E	Takifugu rubripes	TAKRU08156		A0A6D2WXH1
			E	Tetraodon nigroviridis	TETNG11143		H3CV70
			E	Oryzias javanicus	ORYJA15135		A0A437DI43
			E	Oryzias latipes	ORYLA12460		ENSORLG00000009400
			E	Oryzias melastigma	ORYME02320		A0A3B3B8N2
			E	Nothobranchius furzeri	NOTFU11939		D2WS05
			E	Kryptolebias marmoratus	KRYMA03000		A0A3Q3ANT1
			E	Cyprinodon variegatus	CYPVA00635		A0A3Q2GPT6
			E	Gambusia affinis	GAMAF17744		ENSGAFG00000001129.1
			E	Poecilia formosa	POEFO05257		A0A087YRS0
			E	Poecilia reticulata	POERE24224		A0A3P9N1Q7

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