Pairwise Orthologs for DANRE12781

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE12781 (ENSDARG00000040261.9)

E Danio rerio

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO00548		A0A401NYX9
			E	Callorhinchus milii	CALMI31137		X5DV36
			E	Lepisosteus oculatus	LEPOC00429		W5NFR2
			E	Anguilla anguilla	ANGAN01423		XP_035287599
			E	Astyanax mexicanus	ASTMX08183		ENSAMXG00000000881
			E	Pygocentrus nattereri	PYGNA27283		A0A3B4CSK6
			E	Electrophorus electricus	ELEEL13362		A0A4W4F8F1
			E	Ictalurus punctatus	ICTPU35674		A0A2D0RNF7
			E	Latimeria chalumnae	LATCH11588		H3ATY8
			E	Ornithorhynchus anatinus	ORNAN27521		A0A6I8PE94
			E	Tachyglossus aculeatus	TACAU10366		XP_038606908
			E	Procavia capensis	PROCA15975		ENSPCAG00000005288
			E	Loxodonta africana	LOXAF20908		G3SVG2
			E	Echinops telfairi	ECHTE16146		ENSETEG00000004708
			E	Ochotona princeps	OCHPR13516		ENSOPRG00000002943
			E	Dipodomys ordii	DIPOR13417		ENSDORG00000007645.2
			E	Fukomys damarensis	FUKDA10040		ENSFDAG00000007350.1
			E	Heterocephalus glaber	HETGA01973		ENSHGLG00100010505.1
			E	Cavia aperea	CAVAP06363		ENSCAPG00000005178.1
			E	Cavia porcellus	CAVPO08536		A0A286XM37
			E	Chinchilla lanigera	CHILA10349		A0A8C2VPD3
			E	Octodon degus	OCTDE01912		ENSODEG00000015699.1
			E	Jaculus jaculus	JACJA04198		A0A8C5L905
			E	Cricetulus griseus	CRIGR09027		ENSCGRG00000006109.1
			E	Mus musculus	MOUSE22079		Q08775

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