Pairwise Orthologs for DANRE11962

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE11962 (ENSDARG00000042261.8)

E Danio rerio

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL01336		A0A9J7MGX0
			E	Branchiostoma lanceolatum	BRALA26241		BL12982
			E	Eptatretus burgeri	EPTBU08916		A0A8C4X0B7
			E	Chiloscyllium punctatum	CHIPU16719		A0A401T6R4
			E	Callorhinchus milii	CALMI15791		A0A4W3JLR4
			E	Lepisosteus oculatus	LEPOC15724		W5N7S0
			E	Anguilla anguilla	ANGAN00379		XP_035251916
			E	Anabas testudineus	ANATE30015		A0A3Q1HPB2
			E	Seriola dumerili	SERDU00315		A0A3B4U7S1
			E	Echeneis naucrates	ECHNA39995		A0A665VAA8
			E	Cynoglossus semilaevis	CYNSE16677		A0A3P8V158
			E	Scophthalmus maximus	SCOMX10809		A0A8D3B2K6
			E	Dicentrarchus labrax	DICLA05482		XP_051251227
			E	Gasterosteus aculeatus	GASAC06619		G3PAV5
			E	Sparus aurata	SPAAU06000		A0A671YX61
			E	Mola mola	MOLML24583		A0A3Q3WJ50
			E	Tetraodon nigroviridis	TETNG01787		H3BXP0
			E	Oryzias javanicus	ORYJA29494		A0A3S2MEU2
			E	Oryzias latipes	ORYLA10191		ENSORLG00000011249
			E	Oryzias melastigma	ORYME09211		A0A3B3CF46
			E	Nothobranchius furzeri	NOTFU25245		A0A8C6W0T8
			E	Kryptolebias marmoratus	KRYMA14169		A0A3Q3B024
			E	Cyprinodon variegatus	CYPVA30104		A0A3Q2CF09
			E	Gambusia affinis	GAMAF14079		ENSGAFG00000018734.1
			E	Poecilia formosa	POEFO14403		A0A096M541

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