Pairwise Orthologs for DANRE10340

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE10340 (E7FA32)

E Danio rerio | CCR4-NOT transcription complex subunit 10 [cnot10]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA02259		L8HDZ7
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP11841		D3BGB0
			E	Tieghemostelium lacteum	TIELA02812		A0A152A6U5
			E	Guillardia theta	GUITH10021		EKX40573
			E	Guillardia theta (strain CCMP2712)	GUITC15220		L1IWC9
			E	Naegleria fowleri	NAEFO11605		A0A6A5AZI0
			E	Diacronema lutheri	DIALT10027		A0A8J5XMI5
			E	Emiliania huxleyi CCMP1516	EMIHU30595		R1BXE6
			E	Monosiga brevicollis	MONBE07244		A9V686
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO305409		XP_004348660
			E	Creolimax fragrantissima	CREFR07492		CFRG7492
			E	Branchiostoma floridae	BRAFL15853		A0A9J7LBA6
			E	Branchiostoma lanceolatum	BRALA03147		BL02317
			E	Eptatretus burgeri	EPTBU07632		A0A8C4R1E2
			E	Scyliorhinus torazame	SCYTO17211		A0A401PT82
			E	Chiloscyllium punctatum	CHIPU09200		A0A401SKA6
			E	Callorhinchus milii	CALMI27282		A0A4W3JM47
			E	Lepisosteus oculatus	LEPOC02142		W5LZ98
			E	Anguilla anguilla	ANGAN02991		XP_035247999
			E	Anabas testudineus	ANATE08849		ENSATEG00000000839.1
			E	Seriola dumerili	SERDU09588		A0A3B4TIX4
			E	Echeneis naucrates	ECHNA26094		A0A665T0A8
			E	Cynoglossus semilaevis	CYNSE06688		A0A3P8VV36
			E	Scophthalmus maximus	SCOMX10229		ENSSMAG00000017585.1
			E	Dicentrarchus labrax	DICLA16203		A0A8C4HWX7

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