Pairwise Orthologs for DANRE09817

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE09817 (Q568F1)

E Danio rerio | Claudin 8-like [cldn8.2]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform DANRE09816.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anguilla anguilla	ANGAN42966		XP_035242392
			E	Echeneis naucrates	ECHNA07296		A0A665UZT8
			E	Cynoglossus semilaevis	CYNSE22863		A0A3P8VSN4
			E	Dicentrarchus labrax	DICLA08178		XP_051255428
			E	Gasterosteus aculeatus	GASAC19901		G3PD56
			E	Sparus aurata	SPAAU17038		A0A671V6A7
			E	Takifugu rubripes	TAKRU04012		H2UN97
			E	Tetraodon nigroviridis	TETNG05795		H3DNW2
			E	Oryzias latipes	ORYLA03170		ENSORLG00000003376
			E	Oryzias melastigma	ORYME07317		A0A3B3B7M9
			E	Nothobranchius furzeri	NOTFU10386		A0A9D2YE26
			E	Gambusia affinis	GAMAF20365		ENSGAFG00000020685.1
			E	Poecilia formosa	POEFO15227		A0A087YQN2
			E	Xiphophorus maculatus	XIPMA12573		M3ZYM7
			E	Salarias fasciatus	SALFA45805		A0A672G2T9
			E	Astatotilapia calliptera	ASTCA08641		A0A3P8R694
			E	Haplochromis burtoni	HAPBU11807		A0A3Q2W9W4
			E	Oreochromis aureus	OREAU31793		A0A668T098
			E	Oreochromis niloticus	ORENI14759		I3L010
			E	Amphilophus citrinellus	AMPCI00902		A0A3Q0QWN5
			E	Gadus morhua	GADMO17371		A0A8C4ZXW5
			E	Esox lucius	ESOLU01627		A0A3P8YYU8
			E	Salmo salar	SALSA75569		A0A1S3NV55
			E	Salmo trutta	SALTR98491		A0A673YE83
			E	Astyanax mexicanus	ASTMX19083		A0A8B9H5U7

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